PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0195s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 128aa    MW: 14372.3 Da    PI: 11.2333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0195s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.9e-162573355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         y GVr +k +g+WvAeIr+p++   r r++lg++ ta  Aa+a++ a   l+g
  Kalax.0195s0001.1.p 25 YNGVRMRK-WGKWVAEIREPRK---RSRIWLGTYKTAVAAARAHDVALFHLRG 73
                         78***999.**********954...5**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-292482IPR001471AP2/ERF domain
SMARTSM003801.6E-332487IPR001471AP2/ERF domain
PROSITE profilePS5103221.9572481IPR001471AP2/ERF domain
PfamPF008471.7E-102573IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-202582IPR016177DNA-binding domain
PRINTSPR003674.2E-92536IPR001471AP2/ERF domain
CDDcd000189.27E-242583No hitNo description
PRINTSPR003674.2E-94763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MEDKQRGGSS QGRAVFGAGR AGREYNGVRM RKWGKWVAEI REPRKRSRIW LGTYKTAVAA  60
ARAHDVALFH LRGRSEKLNF PEHFAGRVSV EMSAEEIRRM ATAVGAEVDA DELGMRRRKA  120
ADEPSRCG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-152281363ATERF1
3gcc_A2e-152281363ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015889855.17e-37PREDICTED: ethylene-responsive transcription factor RAP2-10
RefseqXP_015889856.17e-37PREDICTED: ethylene-responsive transcription factor RAP2-10
SwissprotQ9FH941e-35ERF10_ARATH; Ethylene-responsive transcription factor ERF010
TrEMBLA5BZA75e-36A5BZA7_VITVI; Putative uncharacterized protein
TrEMBLA6XA904e-36A6XA90_VITVI; Drought responsive element binding protein
TrEMBLV7CRW31e-35V7CRW3_PHAVU; Uncharacterized protein
STRINGVIT_07s0031g00190.t011e-35(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.11e-29cooperatively regulated by ethylene and jasmonate 1